Insertion junction: LMJ.RY0402.208633_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.208633
Chromosome:chromosome 5
Location:3069110
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre05.g238935 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCATTCACTCCAGTCAGTCGATTGGCC
Internal bar code:ACGTACCGTAACGCCGATAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:496
LEAP-Seq percent confirming:94.0246
LEAP-Seq n confirming:12179
LEAP-Seq n nonconfirming:774
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGGTAGTACCCACGCAAT
Suggested primer 2:CATGTTTCATGTGCCGTACC