Insertion junction: LMJ.RY0402.208727_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.208727
Chromosome:chromosome 11
Location:2644778
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre11.g476500 PAO7 Pheophorbide a oxygenase-related protein; (1 of 8) 1.14.12.20 - Pheophorbide a oxygenase / Pheide a oxygenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGCGCAAAGGAAAACGTTGCGCGCGTGT
Internal bar code:CGAAGCGGCGACGGTCCTGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:947
LEAP-Seq percent confirming:20.1629
LEAP-Seq n confirming:1436
LEAP-Seq n nonconfirming:5686
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTTTAGTTTGGGCTGGTA
Suggested primer 2:AAACTTCACGTGGACGAACC