Insertion junction: LMJ.RY0402.208780_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.208780
Chromosome:chromosome 2
Location:984291
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre02.g080200 TRK1 Transketolase, chloroplastic; (1 of 1) 2.2.1.1 - Transketolase / Glycoaldehyde transferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCGGACACTCCCATTCGAGCCAGGAGGA
Internal bar code:GGGCCTGTACCCCGACTCGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1339
LEAP-Seq percent confirming:99.8696
LEAP-Seq n confirming:2298
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GGTTGGAGCATTTGTTGGTT
Suggested primer 2:AAACGCTGTCTGGGGTAATG