Insertion junction: LMJ.RY0402.208841_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.208841
Chromosome:chromosome 12
Location:2106244
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g509200 (1 of 1) PF00722//PF03935 - Glycosyl hydrolases family 16 (Glyco_hydro_16) // Beta-glucan synthesis-associated protein (SKN1) (SKN1); weakly Similar to Beta-Glucan Synthesis-Associated CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCGTTGCGGTCGCACGTGTCGTAGCTGA
Internal bar code:AGGCGCCGTACAATAAGAGGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:794
LEAP-Seq percent confirming:99.5759
LEAP-Seq n confirming:5165
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTTTCGGACCAGGAGAAC
Suggested primer 2:AAAGTCCAACCTTGTGACGG