Insertion junction: LMJ.RY0402.208855_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.208855
Chromosome:chromosome 9
Location:3641940
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g390356 (1 of 1) PTHR22849//PTHR22849:SF0 - WDSAM1 PROTEIN // WD REPEAT, SAM AND U-BOX DOMAIN-CONTAINING PROTEIN 1 intron
Cre09.g390393 (1 of 5) PF01713 - Smr domain (Smr) 5'UTR|outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATAGCTAGGACTTGCATCACCGGCACTTT
Internal bar code:ATAGGTCAACGGTTATTCTACA

Confirmation - LEAP-Seq

LEAP-Seq distance:239
LEAP-Seq percent confirming:99.7888
LEAP-Seq n confirming:8506
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGGCTGTCTTCAAGAGGT
Suggested primer 2:CCTCTTTGAAGTCGTAGCCG