Insertion junction: LMJ.RY0402.209069_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.209069
Chromosome:chromosome 11
Location:1782483
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre11.g467400 (1 of 3) IPR000104//IPR001859 - Antifreeze protein, type I // Trypanosoma cruzi ribosomal protein P2-like 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGCGGCACACGGGATGCCTGGGGGCAAC
Internal bar code:TGGGACAGCGTTTTGAATTCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:739
LEAP-Seq percent confirming:99.7944
LEAP-Seq n confirming:971
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CCATGTACGTATCACTGCCG
Suggested primer 2:AGAGCGACGACGACTTTCAC