Insertion junction: LMJ.RY0402.209219_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.209219
Chromosome:chromosome 3
Location:7919732
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g202300 (1 of 3) IPR000104//IPR001859 - Antifreeze protein, type I // Trypanosoma cruzi ribosomal protein P2-like 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGTACTTTCCTGTGCGCCGGGTCATCCTT
Internal bar code:GCGGCACGCACTTAATCGGAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1050
LEAP-Seq percent confirming:99.0065
LEAP-Seq n confirming:4285
LEAP-Seq n nonconfirming:43
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ACCCCGAGACCAGGTAGACT
Suggested primer 2:TTGTTCCGAATCTCCTCCAC