Insertion junction: LMJ.RY0402.209343_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.209343
Chromosome:chromosome 8
Location:2404785
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre08.g371052 IRE1 (1 of 1) PTHR12506//PTHR12506:SF25//PTHR13954//PTHR13954:SF6 - PROTEIN PHOSPHATASE RELATED // SUBFAMILY NOT NAMED // IRE1-RELATED // SERINE/THREONINE-PROTEIN KINASE/ENDORIBONUCLEASE IRE1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTGAGTGAGAGCGTGTGTTTGAGTGTGT
Internal bar code:CGTTCGTGGCGACTGTTCGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:709
LEAP-Seq percent confirming:99.8394
LEAP-Seq n confirming:1243
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGCCCAAACTACCGTAAA
Suggested primer 2:TGGGTTTGAACATTGGGAAT