Insertion junction: LMJ.RY0402.209464_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.209464
Chromosome:chromosome 17
Location:5912902
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g740050 (1 of 2) IPR003582//IPR011050//IPR019316 - ShKT domain // Pectin lyase fold/virulence factor // G8 domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCAAGTAGCAGGTAGGAGTCACGCACGG
Internal bar code:GAATTCAGGCGGGCGCGACTA

Confirmation - LEAP-Seq

LEAP-Seq distance:495
LEAP-Seq percent confirming:98.0952
LEAP-Seq n confirming:2266
LEAP-Seq n nonconfirming:44
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GTATGGGTATGTGCAGCGTG
Suggested primer 2:GGGAACAGTAGTGATGCGGT