Insertion junction: LMJ.RY0402.209493_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.209493
Chromosome:chromosome 6
Location:5241381
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre06.g282251 (1 of 12) IPR000104//IPR002893 - Antifreeze protein, type I // Zinc finger, MYND-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAACAGTATGCGTCCATGCTCCGCACCC
Internal bar code:TGAAGGGGGCTTTCCATGGGCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:502
LEAP-Seq percent confirming:94.8583
LEAP-Seq n confirming:3782
LEAP-Seq n nonconfirming:205
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTGTGTGTGTGTGTGTGT
Suggested primer 2:CTGAAGGTCTTCTTCGTGGC