Insertion junction: LMJ.RY0402.209641_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.209641
Chromosome:chromosome 14
Location:3416617
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre14.g630550 DEG1B,DEG13,DEG12 Deg protease; (1 of 3) PTHR22939//PTHR22939:SF81 - SERINE PROTEASE FAMILY S1C HTRA-RELATED // PROTEASE DO-LIKE 1, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGATGTGCTGCGAGACGGCAAGGCCACC
Internal bar code:GTAGACAGGAATAACGAAATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:662
LEAP-Seq percent confirming:99.5611
LEAP-Seq n confirming:7712
LEAP-Seq n nonconfirming:34
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTGATGGAAACAAGCCGT
Suggested primer 2:AGAGGGTGTATTGGGTGCTG