Insertion junction: LMJ.RY0402.209649_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.209649
Chromosome:chromosome 13
Location:1428598
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre13.g572050 SMG1 (1 of 1) K08873 - PI-3-kinase-related kinase SMG-1 (SMG1); Nonsense-mediated decay (NMD) pathway protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTGTCAGAGGCACTGGTGCAGTTCGAGT
Internal bar code:TCGGTGGACTTAGTGCATGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:302
LEAP-Seq percent confirming:99.924
LEAP-Seq n confirming:1314
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AAAGTGGTACAGCAGGGGTG
Suggested primer 2:ATGATCTGTACGGAGCCACC