Insertion junction: LMJ.RY0402.209704_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.209704
Chromosome:chromosome 16
Location:2375118
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre16.g659950 PRPS5 Chloroplast Ribosomal Protein S5; (1 of 2) K02988 - small subunit ribosomal protein S5 (RP-S5, MRPS5, rpsE) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGATGGGCCTGTGTGGCCGGTTCTTGTG
Internal bar code:CTTGGGACGAGGTATGTGTTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:351
LEAP-Seq percent confirming:99.7596
LEAP-Seq n confirming:3735
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCGCAAGACTGATTGACT
Suggested primer 2:CAGCCGGTCATAAACCTTGT