Insertion junction: LMJ.RY0402.209723_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.209723
Chromosome:chromosome 11
Location:3434506
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre11.g481000 SNRK2F snRK1 family in Chlamydomonas, subgroup 2; (1 of 1) PTHR24343//PTHR24343:SF175 - SERINE/THREONINE KINASE // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGACTGCGGCGTGTCGCGTGTTGGTCGG
Internal bar code:CCCGCGGTGTGGACCCGTACAA

Confirmation - LEAP-Seq

LEAP-Seq distance:907
LEAP-Seq percent confirming:99.2031
LEAP-Seq n confirming:3361
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GGATGCAGAGCAGCAATGTA
Suggested primer 2:GAGGAGGAGAAGGAGGAGGA