Insertion junction: LMJ.RY0402.209731_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.209731
Chromosome:chromosome 2
Location:374106
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre02.g075850 STK12,SNRK2A,SNRK2,STPK12,ARS11 (1 of 107) IPR000719//IPR002290//IPR011009//IPR020635 - Protein kinase domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain; snRK1 family in Chlamydomonas, subgroup 2 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGAGCTGGTGCTGCGTGGCTCCCTGCTCC
Internal bar code:TAGTCATCGATAGATTTCTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1009
LEAP-Seq percent confirming:99.3859
LEAP-Seq n confirming:971
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GTGAGTGCAAAGGGGTCAAT
Suggested primer 2:AGTTATGGGCTTGGTGTTGC