Insertion junction: LMJ.RY0402.210056_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.210056
Chromosome:chromosome 9
Location:7813953
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g416500 CGL151 Conserved in the Green Lineage; (1 of 2) IPR026939 - At2g23090-like 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTTCCCCTTGCATAGGACAAGTGTTCCC
Internal bar code:GAACTACACACGGGCGCAAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:803
LEAP-Seq percent confirming:99.5975
LEAP-Seq n confirming:2227
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GCACTATCAGGCTCAGGAGG
Suggested primer 2:CTCTGCGGGTTTAGATGAGC