Insertion junction: LMJ.RY0402.210395_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.210395
Chromosome:chromosome 11
Location:896225
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre11.g467656 (1 of 9) IPR007112//IPR009009 - Expansin/pollen allergen, DPBB domain // RlpA-like double-psi beta-barrel domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTCGTGACGTGATGGTTCTACCTGCTCCT
Internal bar code:GAGCTGTGGCCGAATAATCGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:644
LEAP-Seq percent confirming:99.325
LEAP-Seq n confirming:1030
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCCGAGTAGTTCCCTCTG
Suggested primer 2:CGGGAAGATTTGTGTGTGTG