Insertion junction: LMJ.RY0402.210413_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.210413
Chromosome:chromosome 9
Location:5683385
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre09.g401404 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCCTCCGCTGCTCTAATTTCACCTACCT
Internal bar code:CGCGGGACGTATGGGGGTCTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:222
LEAP-Seq percent confirming:99.7579
LEAP-Seq n confirming:412
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TACACCCCCTAAATCCCCTC
Suggested primer 2:TTTGTCGTGCACCTTGGTTA