Insertion junction: LMJ.RY0402.210479_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.210479
Chromosome:chromosome 8
Location:2531767
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre08.g372250 YDIF1,YDIF Putative soluble chloroplast ABCF protein, related to bacterial YdiF.; (1 of 1) PTHR19211//PTHR19211:SF48 - ATP-BINDING TRANSPORT PROTEIN-RELATED // ABC TRANSPORTER F FAMILY MEMBER 2-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTCATTTTGATGCTCTCCACGTGCTCAC
Internal bar code:TGTCGTTTTCTAAGCAGCAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:991
LEAP-Seq percent confirming:99.1224
LEAP-Seq n confirming:23494
LEAP-Seq n nonconfirming:208
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGAAGAAGTGAGCGGGTG
Suggested primer 2:TAGAGCGCAACGTAATGCAC