Insertion junction: LMJ.RY0402.210629_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.210629
Chromosome:chromosome 3
Location:6124717
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g191800 (1 of 33) PF13855 - Leucine rich repeat (LRR_8) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGGACCGAATCCACTGCTGCTGAGCGGT
Internal bar code:TCGCGTGGGCCTTCTGCCGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:929
LEAP-Seq percent confirming:99.5817
LEAP-Seq n confirming:10476
LEAP-Seq n nonconfirming:44
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CCATCACGCTTGTGTCAAAC
Suggested primer 2:CGTTCCTCGTTATTGTCCGT