Insertion junction: LMJ.RY0402.210739_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.210739
Chromosome:chromosome 5
Location:933904
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre05.g247100 COPT1,COTH1 spore coat protein H; (1 of 3) PF08757 - CotH protein (CotH) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACACACAATCAAAAGGCCGCACCTTGGG
Internal bar code:CAGTGACCGGGGACTGCTGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:644
LEAP-Seq percent confirming:49.2117
LEAP-Seq n confirming:1592
LEAP-Seq n nonconfirming:1643
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:AAATTGTGGAGTGGAGTGGC
Suggested primer 2:ACACACACACACACACACGC