Insertion junction: LMJ.RY0402.210936_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.210936
Chromosome:chromosome 10
Location:2270154
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre10.g434400 PF6 (1 of 1) K19090 - CRISPR-associated protein Cas5t (cas5t); Flagellar central pair-associated protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCACAGTGATCAGCGCCTCCATGCCGGCC
Internal bar code:TCCGTCTGATCTCACCGGCGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:430
LEAP-Seq percent confirming:94.0678
LEAP-Seq n confirming:222
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CCCATCACTCAGCCCTATGT
Suggested primer 2:GCTCAGCAGTGTTAGAGGGC