Insertion junction: LMJ.RY0402.211103_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.211103
Chromosome:chromosome 6
Location:2435959
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g268550 GTR,CGL121,CSL1 Cellulose-synthase-like 1; (1 of 1) 2.4.1.32 - Glucomannan 4-beta-mannosyltransferase / Glucomannan-synthase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAGGACGCTGGGGCTGCGCGATGTGCTCT
Internal bar code:CACGAATATAACCCAGGCCCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:638
LEAP-Seq percent confirming:99.4624
LEAP-Seq n confirming:185
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTGCTTACTTCATCACCA
Suggested primer 2:GTACGATTGTTCATGCCACG