Insertion junction: LMJ.RY0402.211152_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.211152
Chromosome:chromosome 1
Location:2192280
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g012000 (1 of 3) IPR000953//IPR016197 - Chromo/chromo shadow domain // Chromo domain-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCAGCTTGTCCTTCACCTCGCTCAGGAT
Internal bar code:CCCCCTCCCGCGGGCGTTGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:876
LEAP-Seq percent confirming:92.0973
LEAP-Seq n confirming:303
LEAP-Seq n nonconfirming:26
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGAGTTCACCTCCTGGTC
Suggested primer 2:GAGAACGACGCCAAGCTAAG