Insertion junction: LMJ.RY0402.211186_3

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.211186
Chromosome:chromosome 12
Location:7978053
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g552150 (1 of 1) PF00069//PF13185 - Protein kinase domain (Pkinase) // GAF domain (GAF_2) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATAGCATTCCATTTGCCCTCCATTTATAT
Internal bar code:TTATAACTCCAATGTGTAAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:496
LEAP-Seq percent confirming:85.5932
LEAP-Seq n confirming:505
LEAP-Seq n nonconfirming:85
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCATCCTGTACCGCTTTT
Suggested primer 2:CAGTTTGCTCCTCCTCCTTG