Insertion junction: LMJ.RY0402.211387_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.211387
Chromosome:chromosome 8
Location:1215849
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre08.g363250 (1 of 3) IPR000104//IPR006553 - Antifreeze protein, type I // Leucine-rich repeat, cysteine-containing subtype intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGCACGTACCGTGAGTCGCGGCAGTGTC
Internal bar code:CACGTGTGGCCAGTATAGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:423
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:153
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGGCAACCACTTCAAGAT
Suggested primer 2:GAATTTTCGCGCGGTAGTAA