Insertion junction: LMJ.RY0402.211449_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.211449
Chromosome:chromosome 3
Location:8138767
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g200650 CHI2 (1 of 1) K17525 - chitinase domain-containing protein 1 (CHID1); Chitinase-like hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTACGAGTCCATCGTGCACAATGCCTGAC
Internal bar code:GAGATAATTCGATGCGTTCTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:843
LEAP-Seq percent confirming:99.277
LEAP-Seq n confirming:29661
LEAP-Seq n nonconfirming:216
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTTAGAAACTTGGCTGGG
Suggested primer 2:CCTGAGTGTTCACGCAAAGA