Insertion junction: LMJ.RY0402.211499_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.211499
Chromosome:chromosome 2
Location:5287498
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre02.g106650 CDPK7 (1 of 6) PTHR24349//PTHR24349:SF23 - SERINE/THREONINE-PROTEIN KINASE // MAP KINASE-ACTIVATED PROTEIN KINASE 5; Calcium/calmodulin-dependent protein kinase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTGTCTTTAACTGACAACCAAGAAGGTC
Internal bar code:GTCGTCCCGGCGGGCACGGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:983
LEAP-Seq percent confirming:95.328
LEAP-Seq n confirming:6917
LEAP-Seq n nonconfirming:339
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:ACCACACCATAGCTTCCCTG
Suggested primer 2:CTCCGGACTCAGGATAGCTG