Insertion junction: LMJ.RY0402.211506_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.211506
Chromosome:chromosome 11
Location:565561
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre11.g467608 (1 of 4) IPR003882//IPR008752 - Pistil-specific extensin-like protein // Peptidase M11, gametolysin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCCTCGCCGCCGCCTCGCCCGCCGTCCT
Internal bar code:GGAACGCGCTGGCCCAGGAGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:375
LEAP-Seq percent confirming:99.6353
LEAP-Seq n confirming:1366
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:ATTTCTACGTGCGGTTGGTC
Suggested primer 2:GTCCACTCACTCGTCCAGGT