Insertion junction: LMJ.RY0402.211644_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.211644
Chromosome:chromosome 1
Location:3354580
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g021200 CGL47 conserved protein with F-box domain; (1 of 10) IPR000104//IPR001810 - Antifreeze protein, type I // F-box domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGAAGGGAGCCAAAGGGCAGCAGCGCGGC
Internal bar code:GGCCTTTGGCACAGCGCAGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:313
LEAP-Seq percent confirming:99.2466
LEAP-Seq n confirming:7640
LEAP-Seq n nonconfirming:58
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:TAGGCTTATAGGAAGGCGCA
Suggested primer 2:CACGTACGCCTGCATGTATC