Insertion junction: LMJ.RY0402.211651_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.211651
Chromosome:chromosome 3
Location:7438380
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g205850 MAE6,MFT6 MATE efflux family protein; (1 of 3) PTHR11206//PTHR11206:SF95 - MULTIDRUG RESISTANCE PROTEIN // MULTI ANTIMICROBIAL EXTRUSION FAMILY PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCGTTTGTGGCCTTGCACAGCGCGTAGG
Internal bar code:CGCAACATTGTAGTTCCAGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:230
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:476
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:TTCTGCTTCCGCCACTCTAT
Suggested primer 2:GGTCGACACCTGGTATTGCT