Insertion junction: LMJ.RY0402.211703_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.211703
Chromosome:chromosome 13
Location:2405945
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre13.g579598 SSS3B,SSS3 (1 of 2) PTHR12526//PTHR12526:SF341 - GLYCOSYLTRANSFERASE // SUBFAMILY NOT NAMED; Soluble starch synthase III intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTCAGGGCGATTTAGGGGTGTCAGGTTA
Internal bar code:AACGTCTCAAGCCTGGAGTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:45
LEAP-Seq percent confirming:25.9259
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:AAACACAAACTCGCAAACCC
Suggested primer 2:GTTTGGAAGCGTCAGAAAGG