Insertion junction: LMJ.RY0402.211995_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.211995
Chromosome:chromosome 2
Location:2758618
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre02.g093950 PUMPKIN (1 of 1) 2.7.4.22 - UMP kinase / Uridylate kinase; Putative plastid UMP kinase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATTGCTGAGGCGCACCATGCGGGGCTGGA
Internal bar code:ATGTGGGCAGGAGGCAAACAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:979
LEAP-Seq percent confirming:97.4342
LEAP-Seq n confirming:10177
LEAP-Seq n nonconfirming:268
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCCTCGCTTCTGGACTAT
Suggested primer 2:GATCTATCGCTGCGTGTTCA