Insertion junction: LMJ.RY0402.211995_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.211995
Chromosome:chromosome 2
Location:2758621
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre02.g093950 PUMPKIN (1 of 1) 2.7.4.22 - UMP kinase / Uridylate kinase; Putative plastid UMP kinase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGCCACCAGGTTAAGCACGGTGGGGTCG
Internal bar code:TGTTAGGCAGCTTATGTCTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:877
LEAP-Seq percent confirming:97.0312
LEAP-Seq n confirming:621
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCCTCGCTTCTGGACTAT
Suggested primer 2:GATCTATCGCTGCGTGTTCA