Insertion junction: LMJ.RY0402.212061_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.212061
Chromosome:chromosome 8
Location:3954221
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre08.g378650 CGl131 (1 of 18) IPR011051 - RmlC-like cupin domain; Conserved in the Green Lineage 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACACCACAACAATGACACCACAGCAGTGA
Internal bar code:GCAGGACGATCATCGATCAGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:977
LEAP-Seq percent confirming:89.6096
LEAP-Seq n confirming:12600
LEAP-Seq n nonconfirming:1461
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGGAACCAAGGGTGGGAT
Suggested primer 2:TCTAGCTGGTGTGGCTGATG