Insertion junction: LMJ.RY0402.212112_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.212112
Chromosome:chromosome 5
Location:1766068
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre05.g242400 PGR5 Proton-gradient related; (1 of 1) PTHR35709:SF1 - PROTEIN PROTON GRADIENT REGULATION 5, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGGATTGTTACATCATGCACCTTCTTGC
Internal bar code:ACTCCAGGAGAAGGAAAGGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:964
LEAP-Seq percent confirming:99.6775
LEAP-Seq n confirming:6490
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:GCTATGGCTTGGTGGTGTTT
Suggested primer 2:TTGTGGACGGTGTCTTTTGA