Insertion junction: LMJ.RY0402.212347_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.212347
Chromosome:chromosome 2
Location:5441879
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre02.g107650 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAATGAATTGGTCGTATCGACTGCGACAG
Internal bar code:AGCTCGTCTCTAACTGTGCCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1032
LEAP-Seq percent confirming:98.6464
LEAP-Seq n confirming:2915
LEAP-Seq n nonconfirming:40
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGCAAGAGTCATTCAGCA
Suggested primer 2:CAGTTTAAGCTTGCGAAGGG