Insertion junction: LMJ.RY0402.212388_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.212388
Chromosome:chromosome 13
Location:1177567
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre13.g569700 OPR56,MBC1 psbC mRNA stabilization factor intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTGCCACTTGGCCCCTGCCTGCACGCGC
Internal bar code:TGTCATGCGCCCGCCCTGACGA

Confirmation - LEAP-Seq

LEAP-Seq distance:794
LEAP-Seq percent confirming:98.8895
LEAP-Seq n confirming:9528
LEAP-Seq n nonconfirming:107
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTCTTCATGGTCGCTGTC
Suggested primer 2:GACCCTGCTCTGAGATCGAC