Insertion junction: LMJ.RY0402.212784_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.212784
Chromosome:chromosome 1
Location:5899292
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre01.g042000 (1 of 1) PF00023//PF00612//PF13637//PF13857 - Ankyrin repeat (Ank) // IQ calmodulin-binding motif (IQ) // Ankyrin repeats (many copies) (Ank_4) // Ankyrin repeats (many copies) (Ank_5) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCCACAGGTGCTGGCCCGCGGCTCTTCC
Internal bar code:GCGGCTTTCCCGTGCCGAGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:89
LEAP-Seq percent confirming:99.537
LEAP-Seq n confirming:215
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CAGACCCTTTCGTCTTCGAG
Suggested primer 2:GGCGGAGACAAAGGTAACAA