Insertion junction: LMJ.RY0402.212819_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.212819
Chromosome:chromosome 3
Location:7969465
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g201950 (1 of 1) IPR003882//IPR008752//IPR024079 - Pistil-specific extensin-like protein // Peptidase M11, gametolysin // Metallopeptidase, catalytic domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCTGAACCCGCCCCGTCCTGTGCTGAAC
Internal bar code:GCAGAGGTAGGCGCGTTGGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:847
LEAP-Seq percent confirming:99.8797
LEAP-Seq n confirming:830
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GCCGACTCTGTTCTTGAAGG
Suggested primer 2:CAGACCCATGTTGTGACCTG