Insertion junction: LMJ.RY0402.213019_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.213019
Chromosome:chromosome 6
Location:3770941
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g278159 CRCO,CO,CON1,CONSTANS CONSTANS-like protein involved in circadian rhythms; (1 of 1) PF00643//PF06203 - B-box zinc finger (zf-B_box) // CCT motif (CCT) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTTTTCGCTTGATGGCGTCGAATACGAG
Internal bar code:TGAGCAAGGGCCATGGGCCACG

Confirmation - LEAP-Seq

LEAP-Seq distance:976
LEAP-Seq percent confirming:99.4451
LEAP-Seq n confirming:14517
LEAP-Seq n nonconfirming:81
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CCACATCGAACGTGTAATCG
Suggested primer 2:ACGCTGAGTGCTAAGGAAGC