Insertion junction: LMJ.RY0402.213106_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.213106
Chromosome:chromosome 6
Location:3162084
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre06.g275450 (1 of 1) PF00069//PF13855 - Protein kinase domain (Pkinase) // Leucine rich repeat (LRR_8) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATACTTGTCGGATGCGCCAAAGGCGTGGAG
Internal bar code:ACGGGTCCCGGCTTAGATACAA

Confirmation - LEAP-Seq

LEAP-Seq distance:783
LEAP-Seq percent confirming:99.1866
LEAP-Seq n confirming:4024
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:AACGCACATGAGCTAAGCCT
Suggested primer 2:TCCGCAGTGACACTTTTGAG