Insertion junction: LMJ.RY0402.213221_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.213221
Chromosome:chromosome 17
Location:5838072
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g739650 MAE1,MFT1 MATE efflux family protein; (1 of 5) PTHR11206//PTHR11206:SF94 - MULTIDRUG RESISTANCE PROTEIN // DNA-DAMAGE-INDUCIBLE PROTEIN F CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGCGGGACCGGCAAGACCGCCTGAGGCA
Internal bar code:GAGTTCAATGGAAGTGCGGACC

Confirmation - LEAP-Seq

LEAP-Seq distance:834
LEAP-Seq percent confirming:99.7506
LEAP-Seq n confirming:2400
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:AGGCCCTGCAAACTCAAGTA
Suggested primer 2:TGATTATGGACGCGATGAAA