Insertion junction: LMJ.RY0402.213792_6

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.213792
Chromosome:chromosome 16
Location:5206478
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre16.g682900 CLPR2 (1 of 1) PTHR10381//PTHR10381:SF15 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT // ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT-RELATED PROTEIN 2, CHLOROPLASTIC; inactive subunit of chloroplast ClpP complex 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTCGACTCCTCAAGCACGCCCTAGCTCCC
Internal bar code:AGATGTAATGACTATGTGTCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:835
LEAP-Seq percent confirming:97.2767
LEAP-Seq n confirming:2429
LEAP-Seq n nonconfirming:68
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:AGCGGCTATATGGCAAGCTA
Suggested primer 2:CGGCACTACCAAAGTGGTTT