Insertion junction: LMJ.RY0402.213893_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.213893
Chromosome:chromosome 12
Location:6900652
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre12.g560700 MDJ1B,CDJ6 (1 of 2) PTHR24078//PTHR24078:SF290 - DNAJ HOMOLOG SUBFAMILY C MEMBER // SUBFAMILY NOT NAMED; Mitochondrial DnaJ-like protein 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACATCCGCCTGTCGTGTCGAAAGGAGTCC
Internal bar code:CTTGGGCTGGGATCGTGCTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:710
LEAP-Seq percent confirming:99.5862
LEAP-Seq n confirming:722
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TTGAGTATGGTCTGGGAGGC
Suggested primer 2:ACGGAACCCAGACGATAGTG