Insertion junction: LMJ.RY0402.213929_4

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.213929
Chromosome:chromosome 11
Location:567246
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre11.g467608 (1 of 4) IPR003882//IPR008752 - Pistil-specific extensin-like protein // Peptidase M11, gametolysin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGCGTGATGGGATGGGGTTTTGGAGAGG
Internal bar code:CACACCTAGTCTTTATACAAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:241
LEAP-Seq percent confirming:98.6864
LEAP-Seq n confirming:601
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTACCTGTGCCTCAACTC
Suggested primer 2:TGTCATACACACACGCCCTT