Insertion junction: LMJ.RY0402.214033_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.214033
Chromosome:chromosome 3
Location:3166126
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre03.g165215 ATG7 (1 of 1) 2.7.7.49//2.7.7.7//2.7.7.80//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Molybdopterin-synthase adenylyltransferase // Ribonuclease H / RNase H; E1 activating enzyme for ATG8 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGATAGGTGAGGGGGTGGTGGTCCGTCA
Internal bar code:TACGAGATGATGTGGCGGGCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:280
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:130
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGGTCGTCACTGGTGAAT
Suggested primer 2:CTACGGTCATTTGTTGGCCT