Insertion junction: LMJ.RY0402.214465_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.214465
Chromosome:chromosome 4
Location:1615311
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre04.g213150 MAE13 MATE efflux family protein; (1 of 5) PTHR11206//PTHR11206:SF94 - MULTIDRUG RESISTANCE PROTEIN // DNA-DAMAGE-INDUCIBLE PROTEIN F intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTATAGTTGAAATAAGTACTGCATGATGG
Internal bar code:CGCCGCGGATCTACGGGACTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:636
LEAP-Seq percent confirming:66.5385
LEAP-Seq n confirming:865
LEAP-Seq n nonconfirming:435
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGACGGAGTGACGGAGAG
Suggested primer 2:AAATGAGGTGTGGTCAAGGC