Insertion junction: LMJ.RY0402.214539_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.214539
Chromosome:chromosome 3
Location:7869853
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g202600 (1 of 38) IPR002048//IPR011992 - EF-hand domain // EF-hand domain pair 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGACGTGCGTGGTTGGCACGACTTCGACT
Internal bar code:ACGCCTCTCCGAGTGCGGTACC

Confirmation - LEAP-Seq

LEAP-Seq distance:1019
LEAP-Seq percent confirming:99.6093
LEAP-Seq n confirming:20904
LEAP-Seq n nonconfirming:82
LEAP-Seq n unique pos:133

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGGTAGGGAGGGGTACAT
Suggested primer 2:AAGTGTTAGTTGCTCGGCGT