Insertion junction: LMJ.RY0402.214571_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.214571
Chromosome:chromosome 2
Location:6879059
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre02.g119651 (1 of 4) 2.4.1.229 - [Skp1-protein]-hydroxyproline N-acetylglucosaminyltransferase / transferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCACGAGAGCGTAACAACCAGGGGCGGCA
Internal bar code:GTATCATCACGGCATCGGCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:325
LEAP-Seq percent confirming:94.3361
LEAP-Seq n confirming:1016
LEAP-Seq n nonconfirming:61
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCACCTCCCTACCCTTGT
Suggested primer 2:CGGTAAAATGGTGGGTATCG